Department of Microbiology – Publications

Publications

Scientific articles (since 2018):

• Petrosyan K., Piwowarczyk R., Ruraż K., Vangronsveld J., Kaca W. (2022) Characterization and diversity of seed endophytic bacteria of the endemic holoparasitic plant Cistanche armena (Orobanchaceae) from a semi-desert area in Armenia. Seed Science Research , First View , pp. 1-10, DOI: https://doi.org/10.1017/S0960258522000204
• Czerwonka G., Durlik-Popinska K., Drabik M., Szczerba M., Kwiatkowska M., Kaca W. (2022) Phosphocholine decoration of Proteus mirabilis O18 LPS induces hydrophobicity of the cell surface and electrokinetic potential, but does not alter the adhesion to solid surfaces. The Cell Surface 8, 100079, https://doi.org/10.1016/j.tcsw.2022.100079
• Kowalski S., Gonciarz W., Belka R., Góral A., Chmiela M., Lechowicz Ł., Kaca W., Żórawski W. (2022) Plasma‐Sprayed Hydroxyapatite Coatings and Their Biological Properties. Coatings 2022, 12, 1317. https://doi.org/10.3390/coatings12091317
• Gmiter D., Kaca W. (2022) Into the understanding the multicellular lifestyle of Proteus mirabilis on solid surfaces. Frontiers in Cellular and Infection Microbiology. DOI 10.3389/fcimb.2022.864305
• Jabłońska-Wawrzycka A., Rogala P., Czerwonka G., Gałczyńska K., Drabik M., Dańczuk M. (2021) Ruthenium Complexes with 2-Pyridin-2-yl-1H-benzimidazole as Potential Antimicrobial Agents: Correlation between Chemical Properties and Anti-Biofilm Effects. Int. J. Mol. Sci. 2021, 22, 10113. https://doi.org/10.3390/ijms221810113
• Gmiter D., Nawrot S., Pacak I., Zegadło K., Kaca W. (2021) Towards a better understanding of the bacterial pan-genome. Folia Biologica et Oecologica 17: 84 96 DOI: http://dx.doi.org/10.18778/1730-2366.16.19
• Matuska-Łyżwa J., Żarnowiec P., Kaca W. (2021) Comparison of Biological Activity of Field Isolates of Steinernema feltiae with a Commercial S. feltiae Biopesticide Product. Insects 2021, 12, 816. https://doi.org/10.3390/insects12090816
• Anderluh M., Berti F., Bzducha-Wrobel A., Chiodo F., Colombo C., Compostella F., Durlik K., Ferhat X., Holmdahl R., Jovanovic D., Kaca W., Lay L., Marinovic-Cincovic M., Marradi M., Ozil M., Polito L., Reina J.J., Reis C.A., Sackstein R., Silipo A., Svajger U., Vanek O., Yamamoto F., Richichi B., van Vliet S.J. (2021) Recent advances on smart glycoconjugate vaccines in infections and cancer. The FEBS Journal (STATE-OF-THE-ART REVIEW) doi:10.1111/febs.15909
• Durlik‑Popińska K., Żarnowiec P., Konieczna‑Kwinkowska I., Lechowicz Ł., Gawęda J., Kaca W. (2021) Correlations between autoantibodies and the ATR-FTIR spectra of sera from rheumatoid arthritis patients. Scientific Reports 2021 11:17886 | https://doi.org/10.1038/s41598-021-96848-w
• Jabłońska-Wawrzycka A.,, Rogala P., Czerwonka G., Michałkiewicz S., Hodorowicz M., Gałczyńska K., Cieślak B., Kowalczyk P. (2021) Tuning Anti-Biofilm Activity of Manganese(II) Complexes: Linking Biological Effectiveness of Heteroaromatic Complexes of Alcohol, Aldehyde, Ketone, and Carboxylic Acid with Structural Effects and Redox Activity. Int. J. Mol. Sci. 2021, 22, 4847. https://doi.org/10.3390/ijms22094847
• Czerwonka G., Gmiter D., Durlik-Popińska K. (2021) Draft Genome of Proteus mirabilis Serogroup O18 Elaborating Phosphocholine-Decorated O Antigen. Frontiers in Cellular and Infection Microbiology | www.frontiersin.org 1 March 2021 | Volume 11 | Article 620010, doi: 10.3389/fcimb.2021.620010
• Anderluh M., Berti F., Bzducha-Wrobel A., Chiodo F., Colombo C., Compostella F., Durlik K., Ferhati X., Holmdahl R., Jovanovic D., Kaca W., Lay L., Marinovic-Cincovic M., Marradi M., Ozil M., Polito L., Reina-Martin J.J., Reis C.A., Sackstein R., Silipo A., Svajger U., Vanek O., Yamamoto F., Richichi B., van Vliet S.J. (2021) Emerging glyco-based strategies to steer immune responses. The FEBS Journal published by John Wiley & Sons Ltd on behalf of 1 Federation of European Biochemical Societies, doi:10.1111/febs.15830
• Gonciarz W., Lechowicz Ł., Urbaniak M., Kaca W., Chmiela M. (2020) Use of Fourier-Transform Infrared Spectroscopy (FT-IR) for Monitoring Experimental Helicobacter pylori Infection and Related Inflammatory Response in Guinea Pig Model. Int. J. Mol. Sci., 22(1), 281; https://doi.org/10.3390/ijms22010281
• Piwowarczyk R., Gmiter D., Durlik K., Ruraż K., Kaca W. (2020) First Report of Orobanche laxissima Parasitizing Pallis’ Ash (Fraxinus pallisiae) in Georgia. Plant Disease, 104(6). DOI: 10.1094/PDIS-10-19-2113-PDN
• Jabłońska-Wawrzycka A., Rogala P., Czerwonka G., Michałkiewicz S., Hodorowicz M., Kowalczyk P. (2020) Ruthenium(IV) Complexes as Potential Inhibitors of Bacterial Biofilm Formation. Molecules, 25(21), 4938; https://doi.org/10.3390/molecules25214938
• Durlik-Popińska K., Żarnowiec P., Lechowicz Ł., Gawęda J., Kaca W. (2020) Antibodies Isolated from Rheumatoid Arthritis Patients against Lysine-Containing Proteus mirabilis O3 (S1959) Lipopolysaccharide May React with Collagen Type I. Int. J. Mol. Sci. 2020, 21(24), 9635; https://doi.org/10.3390/ijms21249635
• Konieczna I., Kolesińska B., Gleńska Olender J., Czerwonka G., Relich I., Frączyk J., Kamiński Z.J., Kaca W. (2020) Synthesis of Bacterial Urease Flap Region Peptide Equivalents and Detection of Rheumatoid Arthritis Antibodies Using Two Methods. International Journal of Peptide Research and Therapeutics, 26:53–65; https://doi.org/10.1007/s10989-019-09815-5
• Durlik K., Żarnowiec P., Piwowarczyk R., Kaca W. (2020) Culturable endophytic bacteria from Phelipanche ramosa (Orobanchaceae) seeds. Seed Science Research, DOI:10.1017/s0960258520000343
• Gonciarz W., Lechowicz Ł., Urbaniak M., Kaca W., Chmiela M. (2020) Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy (FTIR) and Artificial Neural Networks Applied to Investigate Quantitative Changes of Selected Soluble Biomarkers, Correlated with H. pylori Infection in Children and Presumable Consequent Delayed Growth. Journal of Clinical Medicine. 9, 3852. DOI: 10.3390/jcm9123852
• Kłosowski S., Pawlikowski P., Jabłońska E., Podgórska M. (2020) Habitat conditions of the Salvinia natans phytocoenoses in the Vistula and Odra river valleys in Poland. Tuexenia 40:327-344.
• Durlik K., Czerwonka G., Żarnowiec P., Kaca W. (2019) Characterization of Proteus mirabilis Lipopolysaccharide Samples by Infrared Spectroscopy and Serological Methods. In: Pearson M. (eds) Proteus mirabilis. Methods in Molecular Biology, vol 2021. Humana, New York, NY
• Matuska-Łyżwa J., Żeber-Dzikowska I., Gworek B., Chmielewski J. (2019) Nicienie jako wskaźnik zanieczyszczenia gleb ołowiem na terenach uprzemysłowionych. Przemysł chemiczny. 98(6): 980-985, ISSN 0033-2496, e-ISSN 2449-9951
• Marcinkowska M., Puchała A., Matuska-Łyżwa J., Żeber-Dzikowska I., Wójtowicz B., Gworek B., Chmielewski J. (2019) Zasady zielonej chemii w preparatyce eterów 4,4’-bifenolu. Przemysł chemiczny. 98(4):551-555, ISSN 0033-2496, e-ISSN 2449-9951
• Rogala P., Czerwonka G., Michalkiewicz S., Hodorowicz M., Barszcz B., Jablonska-Wawrzycka A. (2019) Synthesis, Structural Characterization and Antimicrobial Evaluation of Ruthenium Complexes with Heteroaromatic Carboxylic Acids. Chemistry & Biodiversity. DOI: 10.1002/cbdv.201900403.
• Gmiter D., Czerwonka G., Drewnowska J.M., Swiecicka I., Kaca W. (2019) Draft genome sequences of Proteus mirabilis K1609 and K670: A model strains for territoriality examination. Current Microbiology. DOI: 10.1007/s00284-018-1598-6.
• Czerwonka G., Gmiter D., Guzy A., Rogala P., Jablonska-Wawrzycka A., Borkowski A., Clapa T., Narozna D., Kowalczyk P., Syczewski M., Drabik M., Danczuk M., Kaca W. (2019) A benzimidazole-based ruthenium(IV) complex inhibits Pseudomonas aeruginosa biofilm formation by interacting with siderophores and the cell envelope, and inducing oxidative stress. Biofouling. DOI: 10.1080/08927014.2018.1564818.
• Kamizela A., Gawdzik B., Urbaniak M., Lechowicz L., Bialonska A., Kutniewska S.E., Gonciarz W., Chmiela M. (2019) New gamma-Halo-delta-lactones and delta-Hydroxy-gamma lactones with Strong Cytotoxic Activity. Molecules. DOI: 10.3390/molecules24101875.
• Ura-Binczyk E., Banas J., Mazurkiewicz B., Solarski W., Lewandowska M., Roguska A., Andrzejczuk M., Balcer M., Kulik S., Zarnowiec P., Kaca W. (2019) On-site monitoring and laboratory characterization of corrosion processes in the geothermal water of Polish Lowland. Geothermics. DOI: 10.1016/j.geothermics.2018.10.002.
• Kaca W., Nowak M., Czerwonka G. (2018) Comparison of genomes of Pseudomonas aeruginosa strains by using chaos game representation. Int J Biomed Data Min. DOI: 10.4172/2090-4924.1000132.
• Borkowski A., Gutowski Ł., Syczewski M., Cłapa T., Czerwonka G. (2018) Adaptation of bacteria Escherichia coli in presence of quaternary ammonium ionic liquids. Ecotoxicol Environ Saf. DOI: 10.1016/j.ecoenv.2018.08.048.
• Gmiter D., Czerwonka G., Kaca W. (2018) Type Vb and Vi secretion systems as competition agents of Gram-negative bacteria. Postep. Mikrobiol. 4 (57), 360-373.
• Kowalczyk P., Borkowski A., Czerwonka G., Clapa T., Ciesla J., Misiewicz A., Borowiec M., Szala M. (2018) The microbial toxicity of quaternary ammonium ionic liquids is dependent on the type of lipopolysaccharide. J Mol Liq. DOI: 10.1016/j.molliq.2018.06.102.
• Kaminski Z.J., Relich I., Konieczna I., Kaca W., Kolesinska B. (2018) Cross-Reactivity of polyclonal antibodies against Canavalia ensiformis (Jack Bean) urease and Helicobacter pylori urease subunit a fragments. Chem Biodivers. DOI: 10.1002/cbdv.201700444.
• Kamizela A., Gawdzik B., Urbaniak M., Lechowicz Ł., Białońska A., Gonciarz W., Chmiela M. (2018) Synthesis, characterization, cytotoxicity, and antibacterial properties of trans-γ-Halo-δ-lactones. ChemistryOpen. DOI: 10.1002/open.201800110.
• Konieczna I., Relich I., Durajski M., Lechowicz L., Chrapek M., Gaweda J., Fraczyk J., Kaminski Z.J. (2018) Novel tool in rheumatoid arthritis diagnosis – The usage of urease flap region peptidomimetics. J Pept Sci. DOI: 10.1002/psc.3084.

Conference papers indexed in WoS (since 2017):

• Gonciarz W, Lechowicz L, Konieczna I, Urbaniak M, Kaca W, Chmiela M. (2018) Analysis of serum samples by the infrared spectroscopy (IR) for selection of spectroscopic motives specific to H. pylori infection. Conference: EHMSG 31st International Workshop on Helicobacter and Microbiota in Inflammation and Cancer, 14-15.08.2018, Kaunas, Lithuania. Published: Helicobacter. 23 (1) SI, P01.08.
• Konieczna I, Lechowicz L, Chrzanowska M, Chyb M, Cholewa S, Grzegorczyk D, Ciura J, Gaweda J. (2018) Drug resistance in bacteria isolated from urine of rheumatoid arthritispatients and induction of resistance by chloroquine. Konferencja/Conference: Congress of the European-League-Against-Rheumatism (EULAR), 13-16.06.2018, Amsterdam, Netherlands. Published: Annals of the rheumatic diseases. DOI: 10.1136/annrheumdis-2018-eular.5607

Conference posters (since 2017):

• Durlik K, Domaszko A, Kaca W. (2019) The presence of antibodies against Epstein Barr virus in rheumatoid arthritis patients’ sera; DIAGMOL 2019, 23.11.2019, Warszawa, Poland
• Durlik K, Żarnowiec P, Piwowarczyk R, Kaca W. (2019) Identification and differentiation of endophytic bacteria from seeds of parasitic Phelipanche ramosa (Orobanchaceae), 8th International Weigl Conference, 26-28.06.2019, Łódź, Poland
• Durlik K, Żarnowiec P, Lechowicz Ł, Kaca W. (2019) Application of Fourier Transform-Infrared Spectroscopy as a Tool for RA Detection. 8th International Weigl Conference. 26-28.06.2019, Łódź, Poland
• Petosyan K, Ślusarczyk J. (2019) Plastic products and their impact on the environment and human health. XXVIII Konferencja Studenckich Kół naukowych “Człowiek i jego środowisko”, 11-12.04.2019, Kielce, Poland
• Trojak M, Ślusarczyk J, Skowron E, Petrosyan K, Kocurek M, Pałyga J. Wpływ zróżnicowanego spektrum świetlnego na morfologię i anatomię liści pomidora zwyczajnego (Solanum lycopersicum L.); Abstracts of Lectures and Posters of the 58th PBS Congress. 58th Congress of the Polish Botanical Society ”Botany without borders”. Ludwik Frey, 2019, Kraków, p.259 [In Polish]
• Kaca W. (2019) Conference: DIAGMOL 2019, 23.11.2019, Warsaw, Poland
• Durlik K, Kaca W. (2018) Detection of antibodies binding non-sugar components of Proteus mirabilis lipopolysaccharides from rheumatoid arthritis patients sera. Conference: 8th Baltic Meeting on Microbial Carbohydrates (BMMC), 9-12.09.2018, Dublin, Ireland.
• Stawiarz M, Gmiter D, Czerwonka G, Kaca W. (2018) The genetic diversity among Dienes incompatible Proteus mirabilis strains. Conference: 4th International Conference of Cell Biology, 11-12.05.2018, Cracow, Poland.
• Szypnicka G, Gmiter D, Kaca W. (2018) Proteus mirabilis swarming motility in presence of various Gram-negative and Gram-positive bacteria. Conference: 4th International Conference of Cell Biology, 11-12.05.2018, Cracow, Poland.
• Durlik K, Kaca W. (2017) Rola niecukrowych składników lipopolisacharydów Proteus mirabilis w reakcjach serologicznych z przeciwciałami ludzkimi. Conference: I Forum Doktorantów Wydziału Matematyczno-Przyrodniczego Uniwersytetu Jana Kochanowskiego w Kielcach, 08.06.2017, Kielce, Poland. [In Polish]

Oral presentation (since 2017):

• Durlik K, Żarnowiec P, Kaca W. (2019) Znaczenie amidu kwasu galakturonowego i lizyny w wiązaniu lipopolisacharydów Proteus mirabilis przez przeciwciała surowic chorych na reumatoidalne zapalenie stawów, III Forum Doktorantów Uniwersytetu Jana Kochanowskiego w Kielcach, 11-12.06.2019, Kielce, Poland [In Polish]
• Gmiter D, Czerwonka G, Durlik K, Żarnowiec P, KacaW. Complete genome sequence of Proteus mirabilis S1959 serogroup O3, Młodzi naukowcy, 22.11.2019, Lublin, Poland
• Petrosyan K, Piwowarczyk R, Kaca W. (2019) Characteristics of endophyte microbiome of family Orobanchaceae” 3 Forum Doktorantów, 10-11.06.2019, Kielce, Poland
• Kaca W, Durlik K, Żarnowiec P. (2019) Correlations of Inflammatory Potential of Gram-Negative Bacterial Endotoxins (lipopolysaccharides, LPSs) of Human Microbiome with Bowel Inflammatory and Cancer Diseases. Conference: Innogly 1st Simposium. 23-25.2019, Santiago de Compostela, Spain.
• Gmiter D, Szypnicka G, Sobczyk P, Kaca W. (2018) Charakterystyka wzrostu rozpełzłego szczepu Proteus mirabilis K39 w obecności bakterii Gram-ujemnych i Gram-dodatnich. Conference: Konferencja Młodzi Naukowcy, 23.11.2018, Lublin, Poland. [In Polish]
• Gmiter D, Czerwonka G, Drewnowska J, Swiecicka I, Gniadkowski M, Kaca W. (2018) Opracowanie modelu do badania dyskryminacji krewniaczej u Proteus mirabilis. Conference: 2 Forum Doktorantów Wydziału Matematyczno-Przyrodniczego, 12-14.06.2018, Kielce, Poland. [In Polish]
• Durlik K, Żarnowiec P, Domaszko A, Kaca W. (2018) Wpływ choliny w podłożu na zmianę widma IR Proteus mirabilis O18. Conference: Młodzi naukowcy, 23.11.2018. [In Polish]
• Durlik K, Kaca W. (2018) Detection of antibodies binding non-sugar components of Proteus mirabilis lipopolysaccharides from rheumatoid arthritis patients sera. Conference: 8th Baltic Meeting on Microbial Carbohydrates (BMMC), 9-12.09. 2018, Dublin, Ireland.
• Durlik K, Kaca W. (2018) Badanie obecności przeciwciał przeciwko lipopolisacharydom Proteus sp. zawierającym niecukrowe składniki w części polisacharydowej w surowicach pacjentów chorych na reumatoidalne zapalenie stawów. Conference: II Forum Doktorantów Wydziału Matematyczno-Przyrodniczego Uniwersytetu Jana Kochanowskiego w Kielcach, 12-14.06.2018, Kielce; Poland. [In Polish]

Invitation lecture (since 2017):

• University of Michigan, prof. W. Kaca, Characterization of Proteus mirabilis strains by phenotypic and genetic methods, 25.09.2019.
• University of Mainz, prof. W. Kaca, Lectures and seminars (Erasmus+), 23.11-1.12.2018.